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MICCAI 2025 Papers with Code β€” Page 3

International Conference on Medical Image Computing and Computer-Assisted Intervention Β· 609 papers

Fetuses Made Simple: Modeling and Tracking of Fetal Shape and Pose

Liu, Yingcheng (Massachusetts Institute of Technology), Golland, Polina (Boston Children's Hospital)

CodeSegmentationPose EstimationOptimizationImageTime SeriesBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A 3D fetal shape and posture statistical model based on SMPL has been constructed, achieving precise alignment and visualization of fetal 3D shapes through alternating optimization of posture and shape on MRI time series; an automated method for conventional fetal measurements is also provided.

Few-Shot, Now for Real: Medical VLMs Adaptation without Balanced Sets or Validation

Silva-RodrΓ­guez, Julio (Γ‰cole de technologie supΓ©rieure MontrΓ©al), Ben Ayed, Ismail (Γ‰TS MontrΓ©al)

CodeClassificationSegmentationDomain AdaptationTransformerVision Language ModelContrastive LearningMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes a new unvalidated, unbalanced support set evaluation framework and a training-free linear probe SS-Text+ for few-shot adaptation in medical visual language models, aimed at achieving robust few-shot adaptation in real medical scenarios.

FIND-Net – Fourier-Integrated Network with Dictionary Kernels for Metal Artifact Reduction

Tasharofi, Farid (Friedrich-Alexander-UniversitΓ€t Erlangen), Maier, Andreas (Friedrich-Alexander-UniversitΓ€t Erlangen)

CodeRestorationOptimizationConvolutional Neural NetworkImageComputed Tomography

🎯 What it does: The FIND-Net framework is proposed, which effectively reduces CT metal artifacts by integrating frequency domain and spatial domain convolutions.

Fine-Grained Rib Fracture Diagnosis with Hyperbolic Embeddings: A Detailed Annotation Framework and Multi-Label Classification Model

Pate, Shripad (Indian Institute of Technology Jodhpur), Mishra, Deepak (Government Medical College Srinagar)

CodeClassificationObject DetectionConvolutional Neural NetworkContrastive LearningImageTextComputed Tomography

🎯 What it does: This paper constructs a fine-grained rib fracture diagnosis framework, first using a Faster R-CNN-based detector to locate fractures, and then employing a multi-head classifier and hyperplane multimodal embedding to achieve multi-label classification across four dimensions: location, displacement, morphology, and quantity.

Fine-tuning Vision Language Models with Graph-based Knowledge for Explainable Medical Image Analysis

Li, Chenjun (Cornell University), Paetzold, Johannes C. (Cornell Tech)

CodeClassificationExplainability and InterpretabilityGraph Neural NetworkSupervised Fine-TuningVision Language ModelImageBiomedical Data

🎯 What it does: This paper proposes a method that combines a heterogeneous graph of biological information with a visual language model, utilizing graph neural networks to stage diabetic retinopathy on OCTA images and generate interpretable diagnostic reports.

Flexibly Distilled 3D Rectified Flow with Anatomical Constraints for Developmental Infant Brain MRI Prediction

Wang, Haifeng (Xian Jiaotong University), Ma, Jianhua (Pazhou Lab)

CodeSegmentationGenerationRectified FlowImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: Proposes the Flexibly Distilled 3D Rectified Flow (FDRF) framework for predicting brain images and tissue segmentation at 12 or 24 months from 6 months of brain MRI;

Flip Distribution Alignment VAE for Multi-Phase MRI Synthesis

Kui, Xiaoyan (Central South University), Zou, Beiji (Central South University)

CodeGenerationData SynthesisAuto EncoderGenerative Adversarial NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A lightweight Flip Distribution Alignment Variational Autoencoder (FDA-VAE) has been designed and implemented to achieve multi-phase CE MRI image synthesis.

Flow Matching for Medical Image Synthesis: Bridging the Gap Between Speed and Quality

Yazdani, Milad (University of British Columbia), Shahriari, Dena (University of British Columbia)

CodeSegmentationGenerationData SynthesisConvolutional Neural NetworkDiffusion modelFlow-based ModelImageBiomedical DataMagnetic Resonance ImagingUltrasound

🎯 What it does: A medical image synthesis framework called MOTFM based on optimal transport flow matching is proposed, which can quickly generate high-quality medical images under various modalities, dimensions, and conditions, and can be used for tasks such as generation, segmentation, and denoising.

FMM-Diff: A Feature Mapping and Merging Diffusion Model for MRI Generation with Missing Modality

Zhong, Wenjin (Macquarie University), Liu, Sidong (Macquarie University)

CodeGenerationData SynthesisDiffusion modelMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A framework called FMM-Diff based on diffusion models is proposed, which can generate high-level sequences (such as DWI or T1ce) through feature mapping and fusion modules when multi-modal MRI is missing.

Focus on Texture: Rethinking Pre-training in Masked Autoencoders for Medical Image Classification

Madan, Chetan (Indian Institute of Technology Delhi), Arora, Chetan (PGIMER Chandigarh)

CodeClassificationTransformerAuto EncoderImageBiomedical DataComputed TomographyUltrasound

🎯 What it does: This paper proposes a GLCM-based Masked Autoencoder (GLCM-MAE) pre-training framework that utilizes texture information to enhance the performance of medical image classification models.

FOCUS: Feature Replay with Optimized Channel-Consistent Dropout for U-Net Skip-Connections

Joham, Simon Johannes (Medical University of Graz), Urschler, Martin (Medical University of Graz)

CodeSegmentationDomain AdaptationSafty and PrivacyConvolutional Neural NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes a feature replay framework named FOCUS for domain incremental continuous medical image segmentation, which retains the skip connections of U-Net while meeting privacy and storage constraints.

Foundation-Model-Boosted Multimodal Learning for fMRI-based Neuropathic Pain Drug Response Prediction

Fan, Wenrui (University of Sheffield), Zhou, Shuo (University of Sheffield)

CodeDrug DiscoveryConvolutional Neural NetworkTransformerMultimodalityTime SeriesBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A multimodal learning framework FMM TC based on foundational models is proposed and implemented to predict drug responses in patients with neuropathic pain.

FoundBioNet: A Foundation-Based Model for IDH Genotyping of Glioma from Multi-Parametric MRI

Farahani, Somayeh (Tehran University of Medical Sciences), Liu, Sidong (Macquarie University)

CodeClassificationSegmentationConvolutional Neural NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper presents FoundBioNet, a foundational model based on SWIN-UNETR, which non-invasively predicts IDH mutation status in multiparametric MRI by integrating tumor-aware feature encoding and T2-FLAIR differences.

FPN-in-FPN: A Nested Multi-Scale Aggregation Network for Polyp Segmentation

Ye, Jin (Monash University), Cai, Jianfei (Monash University)

CodeSegmentationConvolutional Neural NetworkImage

🎯 What it does: A nested multi-scale aggregation network (FPN-in-FPN) is designed and implemented for colon polyp segmentation, combining bidirectional feature fusion and deep supervision.

Frequency-domain Multi-modal Fusion for Language-guided Medical Image Segmentation

Yu, Bo (Anhui University), Wang, Liang (Capital Medical University Affiliated Beijing Friendship Hospital)

CodeSegmentationConvolutional Neural NetworkImageTextMultimodalityBiomedical DataComputed Tomography

🎯 What it does: This paper proposes FMISeg, a language-guided medical image segmentation model that achieves fine segmentation through bidirectional interaction of high and low-frequency visual features and text features.

Frequency-enhanced Multi-granularity Context Network for Efficient Vertebrae Segmentation

Shi, Jian (Dalian University of Technology), Li, Haojie (Shandong University of Science and Technology)

CodeSegmentationImageBiomedical DataMagnetic Resonance ImagingComputed Tomography

🎯 What it does: A multi-granularity context network based on frequency domain enhancement, FMC-Net, is proposed for efficiently and accurately segmenting individual vertebrae in 3D CT and MRI images.

FSA-Net: Fractal-driven Synergistic Anatomy-aware Network for Segmenting White Line of Toldt in Laparoscopic Images

Wu, Kecheng (Hong Kong University of Science and Technology), Zhu, Lei (Hong Kong University of Science and Technology)

CodeSegmentationConvolutional Neural NetworkTransformerImage

🎯 What it does: FSA-Net is proposed for precise segmentation of the white line (WLT) in laparoscopic images, and the first high-quality LTS (White Line of Toldt Segmentation) dataset is constructed.

FunBench: Benchmarking Fundus Reading Skills of MLLMs

Wei, Qijie (Renmin University of China), Li, Xirong (Renmin University of China)

CodeTransformerLarge Language ModelVision Language ModelImageMultimodalityBenchmark

🎯 What it does: This paper constructs FunBench, a hierarchical fundus image benchmark based on visual question answering, to systematically evaluate the fundus reading ability of multimodal large language models (MLLMs).

Fusing Dual Encoders: Single-source Domain Generalization with Extremely Few Annotations

Wang, Ruofan (Nanjing University), Shi, Yinghuan (Southeast University)

CodeSegmentationDomain AdaptationConvolutional Neural NetworkTransformerImageBiomedical DataMagnetic Resonance ImagingComputed Tomography

🎯 What it does: In the field of single-source domain generalization (SDG) for medical image segmentation, the MEDU framework is proposed to enhance the model's generalization performance in scenarios with very few labeled samples.

Future Slot Prediction for Unsupervised Object Discovery in Surgical Video

Liao, Guiqiu (University of Pennsylvania), Hashimoto, Daniel A. (University of Pennsylvania)

CodeObject DetectionSegmentationTransformerVideoBiomedical Data

🎯 What it does: This paper proposes an unsupervised object discovery framework based on dynamic slot attention and future slot prediction (DTST + slot merging), which can generate interpretable object slots in real-time and reconstruct segmentation masks in surgical videos.

FViM: Frequency Vision Mamba for Label-Free Cell Death Pathway Prediction in Lung Cancer Chemotherapy

Ye, Zhaoyi (Wuhan University), Lei, Cheng (Wuhan University)

CodeClassificationRecognitionExplainability and InterpretabilityDrug DiscoveryImageBiomedical Data

🎯 What it does: A label-free high-throughput cell death pathway prediction framework based on multidimensional optical time-stretch imaging flow cytometry (OTS-IFC) and frequency vision Mamba (FViM) was developed, applied to the prediction of cell death status and pathways in lung cancer chemotherapy.

GA-SAM: Geometry-Aware SAM Adaptation with Sparse Annotation-Driven Point Cloud Completion

Li, Shumeng (Nanjing University), Shi, Yinghuan (Southeast University)

CodeSegmentationGenerationPoint CloudBiomedical DataComputed Tomography

🎯 What it does: The GA-SAM framework is proposed, which utilizes point cloud to generate global 3D shapes with only three slices of sparse annotations, and adapts the Segment Anything Model (SAM) through geometric constraints to achieve precise medical image segmentation.

Gaussian Primitive Optimized Deformable Retinal Image Registration

Tian, Xin (University of Bristol), Zhang, Hang (Cornell University)

CodeOptimizationImageMagnetic Resonance Imaging

🎯 What it does: This paper proposes an iterative deformation registration framework based on Gaussian primitives (GPO), which achieves precise registration of retinal images by setting control nodes at significant vascular features and using Gaussian-weighted KNN to propagate displacement information.

GeneMorphFormer: Transformer-Driven Cross-Scale Mapping from Gene Expression to Cortical Morphology

Li, Xiao (Northwest University), Ren, Yudan (Northwest University)

CodeTransformerBiomedical DataMagnetic Resonance Imaging

🎯 What it does: Designed and implemented a Transformer-based GeneMorphFormer model to predict the two-dimensional coordinates of the gray/white matter boundary curve in the cerebral cortex using gene expression data.

General Methods Make Great Domain-specific Foundation Models: A Case-study on Fetal Ultrasound

Ambsdorf, Jakob (University of Copenhagen), Nielsen, Mads (University of Copenhagen)

CodeClassificationSegmentationTransformerContrastive LearningImageBiomedical DataUltrasound

🎯 What it does: Train a self-supervised vision transformer based on DINOv2 as a foundational model in the field of fetal ultrasound, and evaluate it on classification, segmentation, and few-shot tasks.

Generating Novel Brain Morphology by Deforming Learned Templates

Wang, Alan Q. (Stanford University), Adeli, Ehsan (Cornell Tech and Weill Cornell Medicine)

CodeGenerationData SynthesisConvolutional Neural NetworkDiffusion modelImageBiomedical DataMagnetic Resonance ImagingAlzheimer's Disease

🎯 What it does: MorphLDM is proposed, which synthesizes 3D brain MRI by learning deformable templates and generating deformation fields to capture morphological details.

Generative Unsupervised Anomaly Detection with Coarse-Fine Ensemble for Workload Reduction in 3D Non-contrast Brain CT of Emergency Room

Won, Jongjun (Asan Medical Center), Kim, Namkug (Asan Medical Center)

CodeAnomaly DetectionDiffusion modelAuto EncoderImageBiomedical DataComputed Tomography

🎯 What it does: By using generative unsupervised anomaly detection, a coarse-fine hierarchical ensemble model (CMM and FGM) is employed to identify anomalies in brain CT scans, thereby reducing the workload in emergency radiology.

Geometric-Guided Few-Shot Dental Landmark Detection with Human-Centric Foundation Model

Wang, Anbang (Hong Kong University of Science and Technology), Li, Xiaomeng (Southern Medical University)

CodeObject DetectionSegmentationTransformerAuto EncoderImageComputed Tomography

🎯 What it does: A framework for detecting anatomical landmarks of anterior teeth in dental CBCT images based on few-shot learning, called GeoSapiens, is proposed to address the issues of scarce labeling and high costs of manual annotation.

Geometry-Guided Local Alignment for Multi-View Visual Language Pre-Training in Mammography

Du, Yuexi (Yale University), Dvornek, Nicha C. (Yale University)

CodeClassificationRecognitionSegmentationTransformerVision Language ModelContrastive LearningImageTextMultimodalityMagnetic Resonance Imaging

🎯 What it does: Trained a CLIP-based breast imaging-text pre-training model GLAM, utilizing a multi-view geometry-guided local alignment mechanism to learn the correspondence between breast images and reports.

GL-LCM: Global-Local Latent Consistency Models for Fast High-Resolution Bone Suppression in Chest X-Ray Images

Sun, Yifei (Hangzhou Dianzi University), Ge, Ruiquan (Hangzhou Dianzi University)

CodeSegmentationDiffusion modelAuto EncoderGenerative Adversarial NetworkImage

🎯 What it does: A bone suppression method based on the Global-Local Consistency Model (GL-LCM) is proposed, achieving rapid high-resolution bone suppression in chest X-ray images.

GoCa: Trustworthy Multi-Modal RAG with Explicit Thinking Distillation for Reliable Decision-Making in Med-LVLMs

Dai, Pengyu (Institute of Integrated Research, Institute of Science Tokyo), Suzuki, Kenji (Institute of Integrated Research, Institute of Science Tokyo)

CodeRetrievalExplainability and InterpretabilityKnowledge DistillationTransformerLarge Language ModelContrastive LearningMultimodalityBiomedical DataRetrieval-Augmented GenerationChain-of-Thought

🎯 What it does: Proposes the GoCa multimodal retrieval-augmented generation (RAG) system, which enhances the credibility and interpretability of Med-LVLM using Chain-of-Thought (CoT) distillation and multi-agent collaboration.

GPU Accelerated Modeling of Cortical Radial and Tangential Connectivity Changes in Neurodegeneration

Zhang, Hongbo (University of Southern California), Shi, Yonggang (University of Southern California)

CodeOptimizationDiffusion modelBiomedical DataMagnetic Resonance ImagingFibre Orientation DistributionAlzheimer's Disease

🎯 What it does: Decomposing the radial and tangential diffusion signals of the cerebral cortex, a GPU-based probabilistic optimization framework is proposed.

GradInvDiff: Stealing Medical Privacy in Federated Learning via Diffusion-Based Gradient Inversion

Wang, Zhiyuan (Beijing Institute of Technology), Liu, Kun (Beijing Institute of Technology)

CodeFederated LearningSafty and PrivacyAdversarial AttackDiffusion modelImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes GradInvDiff, a method for implementing gradient inversion attacks on medical images using diffusion models in a federated learning scenario.

Graph Laplacian Transformer with Progressive Sampling for Prostate Cancer Grading

Junayed, Masum Shah (University of Connecticut), Nabavi, Sheida (University of Connecticut)

CodeClassificationTransformerImageBiomedical Data

🎯 What it does: This paper proposes a prostate cancer grading system based on graph Laplacian attention Transformer and iterative refinement module, which can adaptively filter high-information patches while maintaining spatial consistency.

Graph-based Neighbor-Aware Network for Gaze-Supervised Medical Image Segmentation

Wu, Shaoxuan (Northwest University), Shen, Dinggang (Shanghai United Imaging Intelligence Co., Ltd.)

CodeSegmentationGraph Neural NetworkContrastive LearningBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A neighborhood-aware network based on graph neural networks (GNAN) is proposed, utilizing eye movement data to achieve weakly supervised segmentation of medical images.

Graph-PAVNet: A Graph-Based Learning Framework for Pulmonary Artery and Vein Separation Using Multimodal Feature Sampling

Li, Qingya (Northeastern University), Tan, Wenjun (Northeastern University)

CodeSegmentationGraph Neural NetworkTransformerMultimodalityBiomedical DataComputed Tomography

🎯 What it does: For the task of separating pulmonary arteries and veins, the authors propose an end-to-end learning framework based on graph structure called Graph-PAVNet.

Guiding Quantitative MRI Reconstruction with Phase-wise Uncertainty

Sun, Haozhong (Tsinghua University), Chen, Huijun (Tsinghua University)

CodeConvolutional Neural NetworkBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes a two-stage qMRI reconstruction method called PUQ, which utilizes phase-related uncertainty guidance. It first recovers multi-phase images and estimates the uncertainty of each phase through an iterative network with MC Dropout, and then performs T1/T2 mapping using pixel-level uncertainty as weights during the parameter fitting stage.

Guiding Registration with Emergent Similarity from Pre-Trained Diffusion Models

Tursynbek, Nurislam (UNC Chapel Hill), Niethammer, Marc (UCSD)

CodeImage TranslationSegmentationConvolutional Neural NetworkDiffusion modelImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes using the intermediate features of a pre-trained diffusion model as a similarity measure to guide the deformation registration network for medical images, achieving semantic alignment in the absence of anatomical structures.

HAGE: Hierarchical Alignment Gene-Enhanced Pathology Representation Learning with Spatial Transcriptomics

Dang, Thao M. (University of Texas at Arlington), Huang, Junzhou (University of Texas at Arlington)

CodeRepresentation LearningConvolutional Neural NetworkContrastive LearningImageMultimodalityBiomedical Data

🎯 What it does: Proposed the HAGE framework, which utilizes gene co-expression embedding and hierarchical alignment to predict spatial transcriptomic expression from histological images.

HalF-SAM: SAM-based Haustral Fold Detection In Colonoscopy with Debris Suppression and Temporal Consistency

Golhar, Mayank (Johns Hopkins University), Durr, Nicholas J. (Johns Hopkins University)

CodeObject DetectionSegmentationVideo

🎯 What it does: Proposed and implemented the HalF-SAM model for detecting the pyloric fold edges in colonoscopy videos.

Hallucination-Aware Multimodal Benchmark for Gastrointestinal Image Analysis with Large Vision-Language Models

Khanal, Bidur (Rochester Institute of Technology), Bhattarai, Binod (University of Aberdeen)

CodeTransformerLarge Language ModelSupervised Fine-TuningVision Language ModelImageTextMultimodalityBenchmark

🎯 What it does: A multimodal gastrointestinal endoscopy image dataset, Gut-VLM, has been constructed, which includes diagnostic reports generated by VLM (ChatGPT-4 Omni), hallucination sentence labels annotated by medical experts, and corresponding correction texts. Based on this data, hallucination-aware fine-tuning of VLM has been conducted.

Hard Sample Mining-based Tongue Diagnosis for Fatty Liver Disease Severity Classification

Chen, Tao (Eindhoven University of Technology), Liu, Kunhong (Xiamen University)

CodeClassificationMixture of ExpertsImage

🎯 What it does: A framework for tongue diagnosis based on hard sample mining (HM-TDF) is proposed to accomplish multi-class classification of fatty liver severity, and the Tongue-FLD tongue image dataset is publicly released.

HARM3-Fusion: Hierarchical Attentional Representation Learning of Multi-Modal, Multi-Temporal, and Multi-Sequence Fusion for Pathological Complete Response Prediction of Head and Neck Squamous Cell Carcinoma

Wang, Jianye (Shenzhen MSU-BIT University), Zhao, Weibing (Shenzhen Msu-Bit University)

CodeClassificationRepresentation LearningConvolutional Neural NetworkTransformerAuto EncoderContrastive LearningMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A hierarchical attention-based multimodal fusion framework HARM-Fusion is proposed for prognostic prediction of pathological complete response (pCR) in head and neck squamous cell carcinoma (HNSCC) patients after neoadjuvant immunotherapy (NCIT).

Harnessing EHRs for Diffusion-based Anomaly Detection on Chest X-rays

Kim, Harim (Handong Global University), Hong, Charmgil (Handong Global University)

CodeAnomaly DetectionDiffusion modelImageBiomedical DataElectronic Health Records

🎯 What it does: The study uses diffusion models combined with structured electronic health records (EHR) to achieve unsupervised anomaly detection in chest X-rays.

HARP: Harmonization and Adaptive Refinement of Pseudo-Labels for Cross-Domain Medical Image Segmentation

Liu, Yulong (University of Science and Technology of China), Sun, Mingzhai (University of Science and Technology of China)

CodeSegmentationDomain AdaptationBiomedical Data

🎯 What it does: This paper proposes the HARP framework for cross-domain semi-supervised medical image segmentation, combining pseudo-label adaptive filtering and inter-domain harmonization modules.

HASD: Hierarchical Adaption for Pathology Slide-Level Domain-Shift

Liu, Jingsong (Technical University of Munich), SchΓΌffler, Peter J. (Technical University of Munich)

CodeDomain AdaptationSupervised Fine-TuningImageBiomedical Data

🎯 What it does: A Hierarchical Adaption for Pathology Slide-Level Domain-Shift (HASD) framework is proposed to address the domain shift problem in pathology images at the whole slide level.

Heterogeneous Masked Attention-Guided Path Convolution for Functional Brain Network Analysis

Xu, Jiakun (South China University of Technology), Xu, Xiangmin (Southern Medical University)

CodeGraph Neural NetworkBiomedical DataMagnetic Resonance ImagingAlzheimer's Disease

🎯 What it does: A heterogeneous mask attention-guided path convolution model (HM-AGPC) has been developed for diagnostic analysis of functional brain networks.

Hierarchical Anatomy-Aware Guidance for Brain Tissue Microstructure Reconstruction from T1-weighted MRI

Li, Yuxing (Beijing Institute of Technology), Ye, Chuyang (Beijing Institute of Technology)

CodeRestorationGenerationTransformerGenerative Adversarial NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A hierarchical anatomy-aware guided framework based on Transformer is proposed to reconstruct brain tissue microstructure mapping using T1-weighted MRI.

Hierarchical Corpus-View-Category Refinement for Carotid Plaque Risk Grading in Ultrasound

Zhu, Zhiyuan (Shenzhen University), Yang, Xin (Shenzhen University)

CodeClassificationConvolutional Neural NetworkMixture of ExpertsContrastive LearningImageUltrasound

🎯 What it does: This study proposes a hierarchical Corpus-View-Category Refinement Framework (CVC-RF) for risk stratification of carotid plaques under multi-view ultrasound.

Hierarchical Feature Learning for Medical Point Clouds via State Space Model

Zhang, Guoqing (Tsinghua University), Li, Yang (Tsinghua University)

CodeClassificationRestorationSegmentationPoint Cloud

🎯 What it does: A hierarchical point cloud feature learning framework based on the state space model (SSM) is proposed for classification, reconstruction, and segmentation tasks of medical point clouds.

Hierarchical Part-based Generative Model for Realistic 3D Blood Vessel

Chen, Siqi (Tsinghua University), Li, Yang (Tsinghua University)

CodeGenerationData SynthesisTransformerAuto EncoderPoint CloudMesh

🎯 What it does: This paper proposes a hierarchical, part-based 3D vascular generation framework that separates the modeling of global tree topology from local geometric details, achieving more refined and coherent vascular network synthesis.

Hierarchical Self-Supervised Adversarial Training for Robust Vision Models in Histopathology

Malik, Hashmat Shadab (Mohamed Bin Zayed University of Artificial Intelligence), Khan, Salman (Mohamed Bin Zayed University of Artificial Intelligence)

CodeSegmentationAdversarial AttackConvolutional Neural NetworkGenerative Adversarial NetworkContrastive LearningImageBiomedical Data

🎯 What it does: This paper proposes Hierarchical Self-Supervised Adversarial Training (HSAT), which generates adversarial samples using the patient-slice-patch three-level relationship and trains the model under a multi-level contrastive learning framework to enhance the robustness of pathological images.

Hierarchical Spatio-temporal Segmentation Network for Ejection Fraction Estimation in Echocardiography Videos

Wang, Dongfang (Nanjing University of Science and Technology), Zhou, Tao (Nanjing University of Science and Technology)

CodeSegmentationConvolutional Neural NetworkVideoBiomedical DataUltrasound

🎯 What it does: This paper proposes a hierarchical spatio-temporal segmentation network HSS-Net for the segmentation of the left ventricular endocardium in cardiac ultrasound videos, and accurately estimates the ejection fraction based on the segmentation results.

High-Fidelity Unified One-to-Many Medical Image Synthesis via Text-Conditioned Latent Diffusion

Zhang, Youjian (JancsiTech), Yu, Gang (Zhejiang University)

CodeGenerationData SynthesisDiffusion modelImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A text-conditioned latent diffusion framework is proposed to achieve one-to-many synthesis of multimodal medical images using a single model.

High-Order Progressive Trajectory Matching for Medical Image Dataset Distillation

Dong, Le, Mou, Lichao (Xidian University)

CodeClassificationData SynthesisKnowledge DistillationConvolutional Neural NetworkImageBiomedical Data

🎯 What it does: A high-order progressive trajectory matching method is proposed for distilling medical imaging datasets, generating privacy-friendly and efficient synthetic datasets.

HiLa: Hierarchical Vision-Language Collaboration for Cancer Survival Prediction

Cui, Jiaqi (Sichuan University), Wang, Yan (East China Normal University)

CodeClassificationRecognitionTransformerLarge Language ModelVision Language ModelContrastive LearningMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A model based on hierarchical visual-language collaboration predicts the survival of cancer patients using multi-level visual features and diverse language prompts.

Historical Report Guided Bi-modal Concurrent Learning for Pathology Report Generation

Zhang, Ling (DAMO Academy, Alibaba Group), Wang, Yan (East China Normal University)

CodeGenerationRetrievalTransformerImageTextMultimodalityRetrieval-Augmented Generation

🎯 What it does: A historical report-guided dual-modal parallel learning framework (BiGen) is proposed, which generates pathology reports for whole slide images (WSI) through visually and textually learnable joint encoding and knowledge retrieval.

Holistic White-light Polyp Classification via Alignment-free Dense Distillation of Auxiliary Optical Chromoendoscopy

Hu, Qiang (Huazhong University of Science and Technology), Wang, Zhiwei (Huazhong University of Science and Technology)

CodeClassificationKnowledge DistillationConvolutional Neural NetworkImage

🎯 What it does: A framework for classifying polyps in full-field white light endoscopy is proposed, utilizing alignment-free dense knowledge distillation to transfer diagnostic information from the NBI domain to the WLI domain.

HoloPointNet: A Deep Learning Framework for Efficient 3D Point Cloud Holography

Amrutkar, Ankit (RWTH Aachen University), Merhof, Dorit (Hannover Medical School)

CodeGenerationComputational EfficiencyConvolutional Neural NetworkGenerative Adversarial NetworkPoint Cloud

🎯 What it does: HoloPointNet is proposed, a deep learning framework capable of directly processing 3D point clouds for holographic phase mapping, achieving rapid generation of multi-plane holographic images.

HRVVS: A High-resolution Video Vasculature Segmentation Network via Hierarchical Autoregressive Residual Priors

Yao, Xincheng (Hong Kong University of Science and Technology), Zhu, Lei (Hong Kong University of Science and Technology)

CodeSegmentationTransformerOptical FlowVideo

🎯 What it does: The HRVVS model is proposed for liver vessel segmentation in high-resolution liver resection surgery videos, and the first Hepa-SEG dataset is constructed.

Hybrid Graph Mamba: Unlocking Non-Euclidean Potential for Accurate Polyp Segmentation

Zhu, Yueyue (Northwestern Polytechnical University), Xia, Yong (Northwestern Polytechnical University)

CodeSegmentationGraph Neural NetworkTransformerImageBiomedical Data

🎯 What it does: Proposes the Hybrid Graph Mamba (HGM) model for colon polyp segmentation, combining Mamba and GCN for multi-scale feature extraction and fusion.

Hybrid State-Space Models and Denoising Training for Unpaired Medical Image Synthesis

Zhang, Junming (Sun Yat-sen University), Jiang, Shancheng (Sun Yat-sen University)

CodeGenerationData SynthesisConvolutional Neural NetworkGenerative Adversarial NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes a hybrid network CRAViM and a cyclic denoising consistency training framework for unpaired medical image synthesis, addressing the issues of global structural distortion and local detail loss caused by traditional convolutional methods.

Hybrid-View Attention Network for Clinically Significant Prostate Cancer Classification in Transrectal Ultrasound

Feng, Zetian (Shenzhen University), Wang, Yi (Shenzhen University)

CodeClassificationConvolutional Neural NetworkTransformerImageBiomedical DataUltrasound

🎯 What it does: A hybrid perspective attention network is proposed for the classification of clinically significant prostate cancer in 3D TRUS images.

HyDA: Hypernetworks for Test Time Domain Adaptation in Medical Imaging Analysis

Serebro, Doron (Ben Gurion University of Negev), Riklin-Raviv, Tammy (Ben Gurion University of Negev)

CodeDomain AdaptationConvolutional Neural NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A hypernetwork-based test-time domain adaptation framework, HyDA, is proposed, which utilizes implicit domain representations to dynamically generate model parameters, enabling the model to adapt to different medical imaging domains without target domain training samples.

HyperPath: Knowledge-Guided Hyperbolic Semantic Hierarchy Modeling for WSI Analysis

Huang, Peixiang (University of Hong Kong), Yu, Lequan (University of Hong Kong)

CodeClassificationVision Language ModelImageBiomedical Data

🎯 What it does: The HyperPath method is proposed, which utilizes text concept-guided hierarchical representation in hypercurvature space for the classification of whole slide images (WSI).

HyperSORT: Self-Organising Robust Training with hyper-networks

Joutard, Samuel (ImFusion), Prevost, Raphael (ImFusion)

CodeRestorationSegmentationConvolutional Neural NetworkImageBiomedical DataComputed Tomography

🎯 What it does: The HyperSORT framework is proposed, which uses a hypernetwork to predict UNet parameters based on the latent vectors of image and annotation variations, achieving self-organizing robust training.

IM-Fuse: A Mamba-based Fusion Block for Brain Tumor Segmentation with Incomplete Modalities

Pipoli, Vittorio (University of Modena and Reggio Emilia), Bolelli, Federico (University of Modena and Reggio Emilia)

CodeSegmentationConvolutional Neural NetworkTransformerMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A multi-modal fusion block IM-Fuse based on Mamba has been constructed for brain tumor segmentation under missing modalities.

Improved Baselines with Synchronized Encoding for Universal Medical Image Segmentation

Yang, Sihan, Sun, Jian (Xi'an Jiaotong University)

CodeSegmentationConvolutional Neural NetworkTransformerImageBiomedical Data

🎯 What it does: A basic model for medical image segmentation based on SAM, called SyncSAM, is proposed, which uses a synchronized dual-branch encoder and a multi-scale dual-branch decoder, significantly improving the segmentation performance of medical images.

Improving Autism Detection with Multimodal Behavioral Analysis

Saakyan, William (Bielefeld University), Drimalla, Hanna (Humboldt University of Berlin)

CodeClassificationAnomaly DetectionVideoMultimodalityAudio

🎯 What it does: Using standardized interactive videos with adult samples, this study extracts and models multimodal non-verbal features such as eye movement, facial expressions, vocal intonation, head movements, and heart rate variability, aiming to achieve computer-aided detection of Autism Spectrum Conditions (ASC).

Improving Motor Imagery EEG Signal Quality with Dynamic Visual Cues: An Innovative Paradigm and Dataset

Yue, Chenxi (Northwestern Polytechnical University), Zhang, Shu (Northwestern Polytechnical University)

CodeClassificationRecognitionConvolutional Neural NetworkTransformerTime SeriesBiomedical Data

🎯 What it does: A motion imagination EEG acquisition paradigm based on real human motion dynamic visual prompts is proposed, and a corresponding dataset is constructed.

Inferring Super-Resolved Gene Expression by Integrating Histology Images and Spatial Transcriptomics with HISTEX

Xue, Shuailin (Yunnan University), Min, Wenwen (Shenzhen Research Institute of Big Data)

CodeGenerationSuper ResolutionTransformerSupervised Fine-TuningImageMultimodalityBiomedical Data

🎯 What it does: By integrating histological images with low-resolution spatial transcriptomics data, a super-resolution gene expression map is generated using bidirectional cross-attention and multi-instance learning.

Influence of Classification Task and Distribution Shift Type on OOD Detection in Fetal Ultrasound

Wong, Chun Kit (Technical University Of Denmark), Feragen, Aasa (DTU Compute)

CodeClassificationAnomaly DetectionConvolutional Neural NetworkImageUltrasound

🎯 What it does: This paper studies how the choice of classification task and the type of distribution shift affect out-of-distribution (OOD) detection and rejection prediction in fetal ultrasound images by comparing the performance of eight uncertainty quantification methods across four different classification tasks.

Information Bottleneck-based Causal Attention for Multi-label Medical Image Recognition

Cui, Xiaoxiao (Shandong University), Li, Shuo (Harbin Institute of Technology)

CodeClassificationRecognitionTransformerContrastive LearningImage

🎯 What it does: This paper proposes an Information Bottleneck-based Causal Attention (IBCA) model for multi-label medical image recognition, which effectively separates task-related and unrelated information, thereby improving diagnostic accuracy.

Instrument-Splatting: Controllable Photorealistic Reconstruction of Surgical Instruments Using Gaussian Splatting

Yang, Shuojue (National University of Singapore), Jin, Yueming (University of Oxford)

CodeGenerationPose EstimationGaussian SplattingVideo

🎯 What it does: This paper proposes the Instrument-Splatting framework, which combines 3D Gaussian splatting with CAD models and utilizes real monocular surgical videos to achieve controllable and highly realistic digital twin reconstruction of surgical instruments.

Integrating meta-analysis in multi-modal brain studies with graph-based attention transformer

Choi, Hyoungshin (Sungkyunkwan University), Park, Hyunjin (VUNO Inc.)

CodeClassificationGraph Neural NetworkTransformerMultimodalityBiomedical DataMagnetic Resonance ImagingPositron Emission TomographyAlzheimer's Disease

🎯 What it does: A multimodal brain network graph Transformer model (MEGATF) is proposed, which utilizes meta-analysis information for the integration of functional and structural data of brain regions and disease classification.

Intelligent Virtual Sonographer (IVS): Enhancing Physician-Robot-Patient Communication

Song, Tianyu (Technical University of Munich), Navab, Nassir (Technische UniversitΓ€t MΓΌnchen)

CodeSegmentationRobotic IntelligenceTransformerLarge Language ModelImageBiomedical DataUltrasound

🎯 What it does: Designed and implemented an embedded conversational virtual ultrasound examination assistant IVS based on dual-instance LLM to enhance real-time communication among doctors, robots, and patients, and to achieve real-time command translation and robot control in an XR environment.

Interactive Segmentation and Report Generation for CT Images

Gu, Yannian (Shanghai Jiao Tong University), Zhang, Xiaofan (Shanghai Jiaotong University)

CodeSegmentationGenerationTransformerImageBiomedical DataComputed Tomography

🎯 What it does: An interactive 3D CT image lesion morphology report generation framework is proposed, which combines point annotation for fine segmentation and simultaneously generates a structured report.

Interpretable fMRI Captioning via Contrastive Learning

Shen, Vyacheslav (KAIST), Kim, Daeshik (KAIST)

CodeRetrievalExplainability and InterpretabilityTransformerLarge Language ModelContrastive LearningMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This study proposes a two-stage contrastive learning framework that utilizes the BLIP-2 model to map fMRI signals into a visual-language embedding space, enabling text descriptions of stimulus images (fMRI captioning) and multimodal retrieval.

Investigating Voxel-level Brain Age Prediction as a Pretext Task for Brain MRI Segmentation

Nasser, Tasneem (University of Calgary), El-Sheimy, Naser (University of Calgary)

CodeSegmentationTransformerSupervised Fine-TuningImageBiomedical DataMagnetic Resonance ImagingAlzheimer's Disease

🎯 What it does: This paper proposes using voxel-level brain age prediction as a self-supervised pre-training task to improve brain MRI segmentation models, particularly enhancing performance in low-sample scenarios.

ISAC: Redefining the Vascular Segmentation Paradigm through Mask Completion for Cross-Domain Generalization

Zhao, Tianyu (Huazhong University of Science and Technology), Yang, Xin (Shenzhen University)

CodeSegmentationDomain AdaptationTransformerImage

🎯 What it does: The ISAC model is proposed, transforming vascular segmentation into a mask completion task based on sparse annotations.

ITMatch: Arch-Guided Semi-Supervised Tooth Arrangement via Iterative Confidence Evaluation

Wang, Chengyuan (Tsinghua University), Zhou, Yanheng (Tsinghua University)

CodePoint Cloud

🎯 What it does: A semi-supervised regression framework called ITMatch is proposed for predicting tooth alignment.

KMUNet: A novel medical image segmentation model based on KAN and Mamba

Zhang, Hongsheng (Xiangtan University), Tang, Hongzhong (Xiangtan University)

CodeSegmentationConvolutional Neural NetworkImageBiomedical DataUltrasound

🎯 What it does: This paper proposes a medical image segmentation network called KMUNet, which integrates KAN and Mamba. It uses a CNN encoder to extract local features in a U-shaped structure and introduces the Mamba module in the decoder to capture global dependencies, while also designing the KAN-PatchEmbed and KAN-SCA modules.

Knowledge-Enhanced Complementary Information Fusion with Temporal Heterogeneous Graph Learning for Disease Prediction

Yang, Zongbao (Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences), Wang, Ruxin (Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences)

CodeGraph Neural NetworkTransformerContrastive LearningGraphTime SeriesBiomedical DataElectronic Health Records

🎯 What it does: This paper proposes the KCIF framework, which constructs a Temporal Heterogeneous Admission Graph (THAG) and integrates complementary information from laboratory tests and treatment events to achieve accurate predictions of ICU patient conditions.

Learning Contrastive Multimodal Fusion with Improved Modality Dropout for Disease Detection and Prediction

Gu, Yi (OMRON SINIC X Corporation), Ma, Jiaxin (OMRON SINIC X Corporation)

CodeClassificationAnomaly DetectionTransformerContrastive LearningMultimodalityTabularBiomedical DataComputed TomographyElectronic Health Records

🎯 What it does: This study investigates a framework that combines improved modality loss (learnable modality tokens + simultaneous modality dropout) with multimodal contrastive learning for disease detection and prediction using CT images and electronic health records.

Learning Disease State from Noisy Ordinal Disease Progression Labels

Schmidt, Gustav (University of TΓΌbingen), MΓΌller, Sarah (University of TΓΌbingen)

CodeClassificationConvolutional Neural NetworkImageBiomedical Data

🎯 What it does: This paper utilizes noisy ordinal disease progression labels (better, stable, worse) to train a Siamese network, learning continuous representations of disease states, and applies this representation for few-shot activity classification on an external OCT dataset.

Learning Explainable Imaging-Genetics Associations Related to a Neurological Disorder

Wang, Jueqi (Boston University), Venkataraman, Archana (Boston University)

CodeExplainability and InterpretabilityTransformerBiomedical DataMagnetic Resonance ImagingAlzheimer's Disease

🎯 What it does: This paper presents NeuroPathX, an interpretable deep learning framework based on early fusion, designed to jointly analyze MRI structural images and genetic polymorphism (SNP) data to explore the interactions between neuroimaging and genetic pathways.

Learning Segmentation from Radiology Reports

Bassi, Pedro R. A. S. (John Hopkins University), Zhou, Zongwei (University of California, San Francisco)

CodeSegmentationConvolutional Neural NetworkTransformerLarge Language ModelImageTextBiomedical DataComputed Tomography

🎯 What it does: A new framework called R-Super is proposed, which utilizes radiology reports for direct supervision of CT tumor segmentation. It maps tumor counts, sizes, and locations from the reports to voxel-level supervision through two new loss functions (volume loss and spherical loss) and is trained and evaluated on multiple datasets.

Learning with Explicit Topological Priors for Chest X-ray Rib Segmentation

Zhao, Xiaowei (Anhui University), Li, Chuanfu (Anhui University of Chinese Medicine)

CodeSegmentationConvolutional Neural NetworkImage

🎯 What it does: In chest X-ray images, a framework is proposed to segment each rib by explicitly embedding the topological priors (connectivity and interaction) of the ribs into the network.

LEAVS: An LLM-based Labeler for Abdominal CT Supervision

Bigolin Lanfredi, Ricardo (National Institutes of Health), Summers, Ronald M. (Icahn School of Medicine at Mount Sinai)

CodeClassificationAnomaly DetectionTransformerLarge Language ModelPrompt EngineeringImageTextComputed TomographyChain-of-Thought

🎯 What it does: Utilizing a large language model through the zero-shot prompting system LEAVS to extract abnormal labels and urgency levels for various organs from abdominal CT reports, aimed at training imaging models.

Lesion-Aware Post-Training of Latent Diffusion Models for Synthesizing Diffusion MRI from CT Perfusion

Lee, Junhyeok (Seoul National University), Choi, Kyu Sung (Seoul National University)

CodeImage TranslationGenerationData SynthesisDiffusion modelImageBiomedical DataMagnetic Resonance ImagingComputed Tomography

🎯 What it does: Translate CT perfusion images of patients with acute ischemic stroke from CT to MRI, and incorporate lesion-aware image spatial loss during the post-training phase of the latent diffusion model.

Lesion-centered vision transformer for stroke outcome prediction from image and clinical data

Liu, Mingtian, Frindel, Carole (Universite Lyon 1)

CodeClassificationExplainability and InterpretabilityTransformerImageMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A lesion-centered Vision Transformer (LC-ViT) is proposed, which combines DWI MRI and 62 clinical variables to predict the modified Rankin Scale (mRS) outcomes 3 months after stroke.

Leveraging Diffusion Models for Continual Test-Time Adaptation in Fundus Image Classification

Liu, Mingsi (University of Electronic Science and Technology of China), Xu, Yanwu (South China University of Technology)

CodeClassificationDomain AdaptationDiffusion modelImageBiomedical Data

🎯 What it does: A continuous testing adaptation framework based on diffusion models, DiffCTA, is proposed for fundus image classification without modifying the source model.

LG-DBGL: Lateralization-Guided Dissociative Brain Graph Learning for Alzheimer’s Disease Identification

Ye, Jiazhen (Inner Mongolia University), Li, Jiapei (Inner Mongolia University)

CodeClassificationRecognitionGraph Neural NetworkGraphBiomedical DataMagnetic Resonance ImagingAlzheimer's Disease

🎯 What it does: A decentralized brain graph learning framework LG-DBGL based on hemispheric decoupling is proposed for Alzheimer's disease recognition.

Lightweight Data-Free Denoising for Detail-Preserving Biomedical Image Restoration

Chobola, TomΓ‘Ε‘ (Technical University of Munich), Peng, Tingying (Technical University of Munich)

CodeRestorationConvolutional Neural NetworkImageBiomedical DataComputed Tomography

🎯 What it does: A lightweight unsupervised denoising framework called Noise2Detail is proposed, which achieves high-quality denoising on single medical images through a three-stage process.

LIP-CAR: a learned inverse problem approach for medical imaging with contrast agent reduction

Evangelista, Davide (University of Bologna), Bianchi, Davide (Sun Yat-sen University)

CodeOptimizationConvolutional Neural NetworkImageBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A method is proposed to transform the problem of reducing contrast agent dosage into a constrained optimization inverse problem by learning a forward operator from high dose to low dose, thereby generating simulated images at high dose levels.

LiteTracker: Leveraging Temporal Causality for Accurate Low-latency Tissue Tracking

Karaoglu, Mert Asim (ImFusion GmbH), Ladikos, Alexander (Technische UniversitΓ€t MΓΌnchen)

CodeObject TrackingComputational EfficiencyTransformerVideoBiomedical DataMagnetic Resonance Imaging

🎯 What it does: A low-latency organization tracking method called LiteTracker is proposed, based on CoTracker3 and achieving real-time end-to-end tracking.

LKA: Large Kernel Adapter for Enhanced Medical Image Classification

Zhu, Ziquan (University of Leicester), Liu, Zhe (Shenzhen University)

CodeClassificationTransformerImageBiomedical Data

🎯 What it does: This paper proposes the Large Kernel Adapter (LKA), which enhances the receptive field by introducing channel-level large kernel convolutions when adapting pre-trained models, thereby improving the accuracy of medical image classification.

Localization Lens for Improving Medical Vision-Language Models

Farooq, Hasan (Lahore University of Management Sciences), Mahmood, Arif (Information Technology University of the Punjab)

CodeRecognitionSegmentationTransformerVision Language ModelContrastive LearningImageMultimodalityBiomedical DataMagnetic Resonance Imaging

🎯 What it does: This paper proposes the 'Positioning Lens' - a set of expert-validated multiple medical image enhancement representations, combined with pixel rearrangement and decoupled contrastive loss, to improve the performance of medical visual-language models (Med-VLM) in anatomical structure and spatial positioning reasoning.

Longitudinal anatomical attention maps for recognizing diagnostic errors from radiologists’ eye movements

Anikina, Anna (University of Copenhagen), Ibragimov, Bulat (University of Iowa)

CodeRecognitionSegmentationRecurrent Neural NetworkTransformerImageBiomedical Data

🎯 What it does: This paper proposes a long-term attention mapping method that combines eye-tracking information with visual Transformers to predict diagnostic errors in chest X-ray readings.

LVPNet: A Latent-variable-based Prediction-driven End-to-end Framework for Lossless Compression of Medical Images

Song, Chenyue (Harbin Institute of Technology), Li, Xiang (Nanyang Technological University)

CodeCompressionConvolutional Neural NetworkImageBiomedical Data

🎯 What it does: An end-to-end lossless medical image compression framework named LVPNet is proposed, which utilizes a Global Multi-Scale Perception Module (GMSM) to extract low-dimensional latent variables and generates pixel distributions through a prediction module, followed by entropy coding.